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ClustalX

Overview

ClustalX is an interactive general purpose multiple alignment program for DNA or proteins, using a window interface for sequence input and display.

Setup

To use ClustalX, it is necessary that the ClustalX environment be setup. This can be done by running a special command sequence once per login session. You may optionally place these commands in your .cshrc (C Shell users) or .bash_profile (Bourne Shell users) to avoid having to manually run these commands on login.

For csh and tcsh:

source /usr/local/setup/clustalx.setup.csh

For bash and sh:

. /usr/local/setup/clustalx.setup.sh
Usage

ClustalX can be invoked using the command clustalx.

Examples

There are no examples for this software package.

Documentation

Documentation is available on LION-XE and LION-XL in the directory /usr/global/clustalx in the file clustalx_help.


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